PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G0872
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 398aa    MW: 43903.6 Da    PI: 9.3434
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G0872genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.7e-08771081344
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                  NReAAr+sR+RKka++++Le+    L++  ++
  Gh_D12G0872  77 NREAARKSRLRKKAYVQQLENSRLRLTELEQE 108
                  ********************976666665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-675105No hitNo description
SuperFamilySSF579595.49E-676112No hitNo description
PfamPF077168.2E-577111IPR004827Basic-leucine zipper domain
PfamPF141441.2E-8154203IPR025422Transcription factor TGA like domain
CDDcd062222.26E-12256367No hitNo description
PfamPF134562.2E-12257368No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MSIGATAIVS SGTGCLDTGQ FMYQKGATFG APLGNGQIEN SADSGLAYNS QQTDTSTDVD  60
ADHKKQLHGI QHGAVMNREA ARKSRLRKKA YVQQLENSRL RLTELEQELQ RARQQGIFIA  120
SGLSGDHGHT VAGNAALAFD MEYGRWLDEH QQLINDIRLA VNSHMGDNEL CVLVGGVMAY  180
YDEVFRLKST GAKADVFHML SVRNRCIHER KKVTTLETTG FVRSYLRELD GLKVVLPIKP  240
KVEELWKPPK SPFVKINFDV TFRKDEHKSC SGIVVRDSEG MVLGSRVVHN GWVPLVFAVE  300
ATVCSQGLQM GLDLGAIAVR VEGDALSVIK KLQKVEEDKS EISATIKVCL WSSKGFQMCK  360
FVNGKRSKKE CVKLLMGIVL ISVLMKLGEG KSFGKWKG
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.252554e-99boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012438631.11e-114PREDICTED: transcription factor HBP-1b(c38)-like
TrEMBLA0A0D2PX511e-115A0A0D2PX51_G
STRINGPOPTR_0008s11710.14e-98(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.12e-47bZIP family protein